Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim50Q810I2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim50Q810I2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.78■□□□□ 0.6
Trim50Q810I2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim50Q810I2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim50Q810I2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trim50Q810I2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim50Q810I2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim50Q810I2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trim50Q810I2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim50Q810I2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim50Q810I2 Gm11421-201ENSMUST00000122124 294 ntBASIC18.75■□□□□ 0.59
Trim50Q810I2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim50Q810I2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trim50Q810I2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim50Q810I2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim50Q810I2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.74■□□□□ 0.59
Trim50Q810I2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim50Q810I2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim50Q810I2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim50Q810I2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim50Q810I2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim50Q810I2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim50Q810I2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim50Q810I2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.72■□□□□ 0.59
Trim50Q810I2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.72■□□□□ 0.59
Trim50Q810I2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim50Q810I2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim50Q810I2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim50Q810I2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim50Q810I2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Trim50Q810I2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim50Q810I2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim50Q810I2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim50Q810I2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.7■□□□□ 0.58
Trim50Q810I2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms