Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rpp38Q80UU2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rpp38Q80UU2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rpp38Q80UU2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpp38Q80UU2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpp38Q80UU2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.29■□□□□ 0.68
Rpp38Q80UU2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpp38Q80UU2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Rpp38Q80UU2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rpp38Q80UU2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp38Q80UU2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp38Q80UU2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpp38Q80UU2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpp38Q80UU2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms