Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rad54bQ6PFE3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rad54bQ6PFE3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Rps24-207ENSMUST00000224568 714 ntBASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rad54bQ6PFE3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rad54bQ6PFE3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rad54bQ6PFE3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rad54bQ6PFE3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rad54bQ6PFE3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rad54bQ6PFE3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rad54bQ6PFE3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.38■□□□□ 0.69
Rad54bQ6PFE3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rad54bQ6PFE3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rad54bQ6PFE3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rad54bQ6PFE3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rad54bQ6PFE3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rad54bQ6PFE3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.33■□□□□ 0.69
Rad54bQ6PFE3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Rad54bQ6PFE3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rad54bQ6PFE3 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.33■□□□□ 0.68
Rad54bQ6PFE3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.33■□□□□ 0.68
Rad54bQ6PFE3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rad54bQ6PFE3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rad54bQ6PFE3 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms