Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tnfaip3Q60769 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tnfaip3Q60769 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tnfaip3Q60769 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.08■□□□□ 0.49
Tnfaip3Q60769 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfaip3Q60769 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tnfaip3Q60769 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Gm10033-202ENSMUST00000211874 928 ntBASIC18.08■□□□□ 0.48
Tnfaip3Q60769 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tnfaip3Q60769 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Gm26571-201ENSMUST00000181399 666 ntBASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Gm42569-201ENSMUST00000200539 472 ntBASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tnfaip3Q60769 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Gm10849-201ENSMUST00000100397 618 ntBASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Reep4-203ENSMUST00000226563 1444 ntBASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tnfaip3Q60769 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Gm13234-201ENSMUST00000120010 747 ntBASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.05■□□□□ 0.48
Tnfaip3Q60769 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tnfaip3Q60769 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tnfaip3Q60769 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms