Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Q3U1D9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.75■□□□□ 0.27
Q3U1D9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.75■□□□□ 0.27
Q3U1D9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.75■□□□□ 0.27
Q3U1D9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Q3U1D9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.75■□□□□ 0.27
Q3U1D9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Q3U1D9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Q3U1D9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.74■□□□□ 0.27
Q3U1D9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Q3U1D9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Q3U1D9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Q3U1D9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Q3U1D9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Q3U1D9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.73■□□□□ 0.27
Q3U1D9 Gm13146-201ENSMUST00000118508 780 ntBASIC16.73■□□□□ 0.27
Q3U1D9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.73■□□□□ 0.27
Q3U1D9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.73■□□□□ 0.27
Q3U1D9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.73■□□□□ 0.27
Q3U1D9 Gm38205-201ENSMUST00000192243 258 ntBASIC16.73■□□□□ 0.27
Q3U1D9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.73■□□□□ 0.27
Q3U1D9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Q3U1D9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.72■□□□□ 0.27
Q3U1D9 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.72■□□□□ 0.27
Q3U1D9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Q3U1D9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Q3U1D9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Q3U1D9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Q3U1D9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Q3U1D9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Q3U1D9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Q3U1D9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Q3U1D9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.7■□□□□ 0.26
Q3U1D9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.7■□□□□ 0.26
Q3U1D9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.7■□□□□ 0.26
Q3U1D9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.7■□□□□ 0.26
Q3U1D9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Q3U1D9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Q3U1D9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Q3U1D9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.69■□□□□ 0.26
Q3U1D9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Q3U1D9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Q3U1D9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Q3U1D9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.69■□□□□ 0.26
Q3U1D9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Q3U1D9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Q3U1D9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Q3U1D9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
Q3U1D9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.68■□□□□ 0.26
Q3U1D9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Q3U1D9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.68■□□□□ 0.26
Q3U1D9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Q3U1D9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.68■□□□□ 0.26
Q3U1D9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Q3U1D9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Q3U1D9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.67■□□□□ 0.26
Q3U1D9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q3U1D9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q3U1D9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Q3U1D9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms