Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gm42778-201ENSMUST00000199644 553 ntBASIC18.14■□□□□ 0.49
Nkx3-2P97503 AV356131-201ENSMUST00000206201 750 ntBASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nkx3-2P97503 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nkx3-2P97503 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Nkx3-2P97503 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Nkx3-2P97503 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Nkx3-2P97503 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.09■□□□□ 0.49
Nkx3-2P97503 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.09■□□□□ 0.49
Nkx3-2P97503 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Gm13234-201ENSMUST00000120010 747 ntBASIC18.09■□□□□ 0.49
Nkx3-2P97503 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Nkx3-2P97503 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx3-2P97503 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Nkx3-2P97503 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Gm37179-201ENSMUST00000194862 823 ntBASIC18.08■□□□□ 0.48
Nkx3-2P97503 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nkx3-2P97503 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nkx3-2P97503 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms