Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.21■□□□□ 0.35
SgcbP82349 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SgcbP82349 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SgcbP82349 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SgcbP82349 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Gm27801-201ENSMUST00000184174 223 ntBASIC17.2■□□□□ 0.34
SgcbP82349 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SgcbP82349 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SgcbP82349 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.19■□□□□ 0.34
SgcbP82349 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SgcbP82349 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Gm18284-201ENSMUST00000172604 624 ntBASIC17.18■□□□□ 0.34
SgcbP82349 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.18■□□□□ 0.34
SgcbP82349 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.18■□□□□ 0.34
SgcbP82349 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.18■□□□□ 0.34
SgcbP82349 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SgcbP82349 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SgcbP82349 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SgcbP82349 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.17■□□□□ 0.34
SgcbP82349 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.17■□□□□ 0.34
SgcbP82349 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.17■□□□□ 0.34
SgcbP82349 Gm5874-201ENSMUST00000096101 508 ntBASIC17.17■□□□□ 0.34
SgcbP82349 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SgcbP82349 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SgcbP82349 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.16■□□□□ 0.34
SgcbP82349 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Gm9988-201ENSMUST00000069786 435 ntBASIC17.16■□□□□ 0.34
SgcbP82349 Gm10493-201ENSMUST00000097270 612 ntBASIC17.16■□□□□ 0.34
SgcbP82349 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SgcbP82349 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SgcbP82349 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.15■□□□□ 0.34
SgcbP82349 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
SgcbP82349 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcbP82349 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcbP82349 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SgcbP82349 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcbP82349 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SgcbP82349 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcbP82349 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SgcbP82349 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SgcbP82349 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms