Protein–RNA interactions for Protein: P61375

Lhx5, LIM/homeobox protein Lhx5, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx5P61375 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.22■□□□□ 0.83
Lhx5P61375 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lhx5P61375 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lhx5P61375 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lhx5P61375 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lhx5P61375 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lhx5P61375 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Lhx5P61375 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.21■□□□□ 0.83
Lhx5P61375 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx5P61375 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx5P61375 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lhx5P61375 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lhx5P61375 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lhx5P61375 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.2■□□□□ 0.82
Lhx5P61375 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.2■□□□□ 0.82
Lhx5P61375 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.2■□□□□ 0.82
Lhx5P61375 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lhx5P61375 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lhx5P61375 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Lhx5P61375 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.19■□□□□ 0.82
Lhx5P61375 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lhx5P61375 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Lhx5P61375 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.19■□□□□ 0.82
Lhx5P61375 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx5P61375 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lhx5P61375 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.18■□□□□ 0.82
Lhx5P61375 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.18■□□□□ 0.82
Lhx5P61375 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Lhx5P61375 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.18■□□□□ 0.82
Lhx5P61375 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx5P61375 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx5P61375 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx5P61375 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx5P61375 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx5P61375 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Lhx5P61375 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.17■□□□□ 0.82
Lhx5P61375 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Lhx5P61375 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx5P61375 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lhx5P61375 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx5P61375 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lhx5P61375 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.16■□□□□ 0.82
Lhx5P61375 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.16■□□□□ 0.82
Lhx5P61375 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Lhx5P61375 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx5P61375 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx5P61375 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx5P61375 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx5P61375 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx5P61375 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lhx5P61375 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
Lhx5P61375 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx5P61375 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Lhx5P61375 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Lhx5P61375 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lhx5P61375 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx5P61375 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lhx5P61375 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx5P61375 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lhx5P61375 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx5P61375 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lhx5P61375 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lhx5P61375 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx5P61375 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms