Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nub1P54729 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nub1P54729 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.74■□□□□ 0.91
Nub1P54729 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.73■□□□□ 0.91
Nub1P54729 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nub1P54729 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nub1P54729 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nub1P54729 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.72■□□□□ 0.91
Nub1P54729 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nub1P54729 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nub1P54729 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.71■□□□□ 0.91
Nub1P54729 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nub1P54729 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nub1P54729 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nub1P54729 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nub1P54729 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nub1P54729 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nub1P54729 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nub1P54729 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.69■□□□□ 0.9
Nub1P54729 Gm43060-201ENSMUST00000200621 289 ntBASIC20.69■□□□□ 0.9
Nub1P54729 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Nub1P54729 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nub1P54729 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nub1P54729 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nub1P54729 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Nub1P54729 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Nub1P54729 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nub1P54729 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.68■□□□□ 0.9
Nub1P54729 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.68■□□□□ 0.9
Nub1P54729 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Nub1P54729 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.67■□□□□ 0.9
Nub1P54729 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Golph3-202ENSMUST00000226517 2359 ntBASIC20.67■□□□□ 0.9
Nub1P54729 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nub1P54729 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Nub1P54729 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nub1P54729 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Nub1P54729 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nub1P54729 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.66■□□□□ 0.9
Nub1P54729 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.66■□□□□ 0.9
Nub1P54729 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Nub1P54729 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Nub1P54729 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nub1P54729 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Nub1P54729 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nub1P54729 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Nub1P54729 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms