Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HmgclP38060 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
HmgclP38060 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HmgclP38060 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HmgclP38060 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
HmgclP38060 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
HmgclP38060 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HmgclP38060 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
HmgclP38060 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
HmgclP38060 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HmgclP38060 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.02■□□□□ 0.64
HmgclP38060 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.02■□□□□ 0.64
HmgclP38060 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HmgclP38060 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HmgclP38060 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.01■□□□□ 0.63
HmgclP38060 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
HmgclP38060 Gm43060-201ENSMUST00000200621 289 ntBASIC19.01■□□□□ 0.63
HmgclP38060 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HmgclP38060 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19■□□□□ 0.63
HmgclP38060 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19■□□□□ 0.63
HmgclP38060 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
HmgclP38060 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HmgclP38060 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HmgclP38060 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.99■□□□□ 0.63
HmgclP38060 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HmgclP38060 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HmgclP38060 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HmgclP38060 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.99■□□□□ 0.63
HmgclP38060 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HmgclP38060 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HmgclP38060 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.98■□□□□ 0.63
HmgclP38060 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.98■□□□□ 0.63
HmgclP38060 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HmgclP38060 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HmgclP38060 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.97■□□□□ 0.63
HmgclP38060 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HmgclP38060 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HmgclP38060 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms