Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd44P15379 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cd44P15379 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Cd44P15379 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cd44P15379 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd44P15379 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cd44P15379 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.28■□□□□ 0.84
Cd44P15379 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd44P15379 Serp2-204ENSMUST00000228055 705 ntBASIC20.28■□□□□ 0.84
Cd44P15379 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cd44P15379 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.28■□□□□ 0.84
Cd44P15379 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd44P15379 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cd44P15379 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cd44P15379 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd44P15379 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd44P15379 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd44P15379 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
Cd44P15379 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.27■□□□□ 0.84
Cd44P15379 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Cd44P15379 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd44P15379 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.27■□□□□ 0.83
Cd44P15379 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cd44P15379 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cd44P15379 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Cd44P15379 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Cd44P15379 Gm45102-201ENSMUST00000207427 857 ntBASIC20.26■□□□□ 0.83
Cd44P15379 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cd44P15379 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd44P15379 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.25■□□□□ 0.83
Cd44P15379 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd44P15379 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.25■□□□□ 0.83
Cd44P15379 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.24■□□□□ 0.83
Cd44P15379 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Cd44P15379 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.24■□□□□ 0.83
Cd44P15379 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cd44P15379 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.23■□□□□ 0.83
Cd44P15379 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cd44P15379 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cd44P15379 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd44P15379 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cd44P15379 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Cd44P15379 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Cd44P15379 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cd44P15379 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cd44P15379 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.22■□□□□ 0.83
Cd44P15379 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cd44P15379 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd44P15379 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms