Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PrnpP04925 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PrnpP04925 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PrnpP04925 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
PrnpP04925 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.11■□□□□ 0.81
PrnpP04925 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.11■□□□□ 0.81
PrnpP04925 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PrnpP04925 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.1■□□□□ 0.81
PrnpP04925 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PrnpP04925 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
PrnpP04925 Gm13168-201ENSMUST00000121771 632 ntBASIC20.1■□□□□ 0.81
PrnpP04925 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.1■□□□□ 0.81
PrnpP04925 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.1■□□□□ 0.81
PrnpP04925 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
PrnpP04925 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PrnpP04925 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.09■□□□□ 0.81
PrnpP04925 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
PrnpP04925 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PrnpP04925 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PrnpP04925 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.09■□□□□ 0.81
PrnpP04925 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PrnpP04925 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.08■□□□□ 0.81
PrnpP04925 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.08■□□□□ 0.81
PrnpP04925 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.08■□□□□ 0.81
PrnpP04925 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PrnpP04925 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
PrnpP04925 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PrnpP04925 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.08■□□□□ 0.81
PrnpP04925 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PrnpP04925 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PrnpP04925 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PrnpP04925 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PrnpP04925 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PrnpP04925 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PrnpP04925 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PrnpP04925 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
PrnpP04925 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PrnpP04925 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.07■□□□□ 0.8
PrnpP04925 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.07■□□□□ 0.8
PrnpP04925 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.07■□□□□ 0.8
PrnpP04925 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.07■□□□□ 0.8
PrnpP04925 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PrnpP04925 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.07■□□□□ 0.8
PrnpP04925 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PrnpP04925 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PrnpP04925 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.06■□□□□ 0.8
PrnpP04925 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
PrnpP04925 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.06■□□□□ 0.8
PrnpP04925 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.06■□□□□ 0.8
PrnpP04925 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PrnpP04925 Gm37856-201ENSMUST00000191634 999 ntBASIC20.06■□□□□ 0.8
PrnpP04925 Gm26524-201ENSMUST00000192339 390 ntBASIC20.06■□□□□ 0.8
PrnpP04925 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PrnpP04925 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PrnpP04925 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PrnpP04925 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PrnpP04925 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PrnpP04925 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.05■□□□□ 0.8
PrnpP04925 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.05■□□□□ 0.8
PrnpP04925 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.05■□□□□ 0.8
PrnpP04925 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PrnpP04925 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.05■□□□□ 0.8
PrnpP04925 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.05■□□□□ 0.8
PrnpP04925 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PrnpP04925 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PrnpP04925 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.05■□□□□ 0.8
PrnpP04925 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PrnpP04925 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PrnpP04925 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PrnpP04925 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.05■□□□□ 0.8
PrnpP04925 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PrnpP04925 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PrnpP04925 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PrnpP04925 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PrnpP04925 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PrnpP04925 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 212.4 ms