Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm27801-201ENSMUST00000184174 223 ntBASIC18.82■□□□□ 0.6
Npc1O35604 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Npc1O35604 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npc1O35604 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Npc1O35604 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Npc1O35604 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.81■□□□□ 0.6
Npc1O35604 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npc1O35604 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.8■□□□□ 0.6
Npc1O35604 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1O35604 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.8■□□□□ 0.6
Npc1O35604 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Npc1O35604 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.8■□□□□ 0.6
Npc1O35604 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1O35604 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1O35604 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.8■□□□□ 0.6
Npc1O35604 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1O35604 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npc1O35604 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1O35604 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1O35604 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1O35604 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npc1O35604 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
Npc1O35604 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.78■□□□□ 0.6
Npc1O35604 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.78■□□□□ 0.6
Npc1O35604 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.78■□□□□ 0.6
Npc1O35604 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.78■□□□□ 0.6
Npc1O35604 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.78■□□□□ 0.6
Npc1O35604 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.78■□□□□ 0.6
Npc1O35604 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Npc1O35604 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Npc1O35604 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Npc1O35604 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Npc1O35604 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.76■□□□□ 0.59
Npc1O35604 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.76■□□□□ 0.59
Npc1O35604 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Npc1O35604 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Npc1O35604 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.75■□□□□ 0.59
Npc1O35604 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Npc1O35604 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Npc1O35604 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Npc1O35604 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.74■□□□□ 0.59
Npc1O35604 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.74■□□□□ 0.59
Npc1O35604 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Npc1O35604 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Npc1O35604 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1O35604 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1O35604 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.73■□□□□ 0.59
Npc1O35604 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.73■□□□□ 0.59
Npc1O35604 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1O35604 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Npc1O35604 AA386476-201ENSMUST00000098781 1665 ntBASIC18.73■□□□□ 0.59
Npc1O35604 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
Npc1O35604 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms