Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11aO35305 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf11aO35305 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf11aO35305 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Tnfrsf11aO35305 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.83■□□□□ 0.93
Tnfrsf11aO35305 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfrsf11aO35305 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf11aO35305 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf11aO35305 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Gm27801-201ENSMUST00000184174 223 ntBASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
Tnfrsf11aO35305 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf11aO35305 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf11aO35305 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf11aO35305 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfrsf11aO35305 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfrsf11aO35305 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tnfrsf11aO35305 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf11aO35305 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms