Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.03■□□□□ -0
Tnfsf11O35235 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.03■□□□□ -0
Tnfsf11O35235 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.03■□□□□ -0
Tnfsf11O35235 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Tnfsf11O35235 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Tnfsf11O35235 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.02■□□□□ -0
Tnfsf11O35235 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Tnfsf11O35235 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.02■□□□□ -0
Tnfsf11O35235 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.02■□□□□ -0
Tnfsf11O35235 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.02■□□□□ -0
Tnfsf11O35235 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Tnfsf11O35235 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfsf11O35235 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfsf11O35235 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Tnfsf11O35235 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Tnfsf11O35235 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Gm45444-201ENSMUST00000211394 898 ntBASIC15.01□□□□□ -0.01
Tnfsf11O35235 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.01□□□□□ -0.01
Tnfsf11O35235 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tnfsf11O35235 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Rncr4-201ENSMUST00000194541 2234 ntBASIC15□□□□□ -0.01
Tnfsf11O35235 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15□□□□□ -0.01
Tnfsf11O35235 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tnfsf11O35235 Gm10399-202ENSMUST00000202768 748 ntBASIC15□□□□□ -0.01
Tnfsf11O35235 Gm7143-201ENSMUST00000222811 859 ntBASIC15□□□□□ -0.01
Tnfsf11O35235 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15□□□□□ -0.01
Tnfsf11O35235 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15□□□□□ -0.01
Tnfsf11O35235 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Tnfsf11O35235 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tnfsf11O35235 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Mir6236-201ENSMUST00000184437 123 ntBASIC14.99□□□□□ -0.01
Tnfsf11O35235 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.99□□□□□ -0.01
Tnfsf11O35235 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tnfsf11O35235 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Tnfsf11O35235 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms