Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Smim22J3QP37 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.32■□□□□ 0.68
Smim22J3QP37 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Smim22J3QP37 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.32■□□□□ 0.68
Smim22J3QP37 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim22J3QP37 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smim22J3QP37 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Smim22J3QP37 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Smim22J3QP37 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.31■□□□□ 0.68
Smim22J3QP37 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.31■□□□□ 0.68
Smim22J3QP37 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smim22J3QP37 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim22J3QP37 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim22J3QP37 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.3■□□□□ 0.68
Smim22J3QP37 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smim22J3QP37 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smim22J3QP37 Gm23634-201ENSMUST00000175071 91 ntBASIC19.3■□□□□ 0.68
Smim22J3QP37 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.3■□□□□ 0.68
Smim22J3QP37 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim22J3QP37 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smim22J3QP37 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Gm2559-201ENSMUST00000201323 363 ntBASIC19.29■□□□□ 0.68
Smim22J3QP37 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim22J3QP37 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.28■□□□□ 0.68
Smim22J3QP37 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.28■□□□□ 0.68
Smim22J3QP37 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.28■□□□□ 0.68
Smim22J3QP37 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim22J3QP37 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.27■□□□□ 0.68
Smim22J3QP37 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.27■□□□□ 0.68
Smim22J3QP37 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim22J3QP37 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim22J3QP37 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim22J3QP37 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.26■□□□□ 0.67
Smim22J3QP37 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.26■□□□□ 0.67
Smim22J3QP37 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.26■□□□□ 0.67
Smim22J3QP37 Gm6345-202ENSMUST00000180900 204 ntBASIC19.26■□□□□ 0.67
Smim22J3QP37 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.26■□□□□ 0.67
Smim22J3QP37 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smim22J3QP37 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smim22J3QP37 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.25■□□□□ 0.67
Smim22J3QP37 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.25■□□□□ 0.67
Smim22J3QP37 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 AA414768-201ENSMUST00000121924 1257 ntBASIC19.25■□□□□ 0.67
Smim22J3QP37 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.25■□□□□ 0.67
Smim22J3QP37 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smim22J3QP37 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smim22J3QP37 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim22J3QP37 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms