Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
R3hdm1E9Q9Q2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.28■■□□□ 1
R3hdm1E9Q9Q2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Gm10812-201ENSMUST00000099864 546 ntBASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm1E9Q9Q2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
R3hdm1E9Q9Q2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Gm13148-201ENSMUST00000118892 745 ntBASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Gm7977-201ENSMUST00000193787 748 ntBASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm1E9Q9Q2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
R3hdm1E9Q9Q2 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Mir6982-201ENSMUST00000184354 68 ntBASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
R3hdm1E9Q9Q2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
R3hdm1E9Q9Q2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm1E9Q9Q2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.21■□□□□ 0.99
R3hdm1E9Q9Q2 Gm20049-201ENSMUST00000219950 730 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms