Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ptchd4B9EKX1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
Ptchd4B9EKX1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ptchd4B9EKX1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Ptchd4B9EKX1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ptchd4B9EKX1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ptchd4B9EKX1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ptchd4B9EKX1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ptchd4B9EKX1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ptchd4B9EKX1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ptchd4B9EKX1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
Ptchd4B9EKX1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ptchd4B9EKX1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Gm6211-202ENSMUST00000167849 925 ntBASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ptchd4B9EKX1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ptchd4B9EKX1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms