Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd3B1AR17 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd3B1AR17 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chd3B1AR17 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chd3B1AR17 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.96■□□□□ 0.63
Chd3B1AR17 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chd3B1AR17 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Chd3B1AR17 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chd3B1AR17 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chd3B1AR17 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.95■□□□□ 0.62
Chd3B1AR17 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chd3B1AR17 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Chd3B1AR17 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.94■□□□□ 0.62
Chd3B1AR17 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chd3B1AR17 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chd3B1AR17 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd3B1AR17 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chd3B1AR17 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.93■□□□□ 0.62
Chd3B1AR17 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chd3B1AR17 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Gm13534-201ENSMUST00000121169 513 ntBASIC18.92■□□□□ 0.62
Chd3B1AR17 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Chd3B1AR17 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.92■□□□□ 0.62
Chd3B1AR17 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chd3B1AR17 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chd3B1AR17 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chd3B1AR17 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Chd3B1AR17 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.91■□□□□ 0.62
Chd3B1AR17 Gm6420-201ENSMUST00000193885 723 ntBASIC18.91■□□□□ 0.62
Chd3B1AR17 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.91■□□□□ 0.62
Chd3B1AR17 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chd3B1AR17 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd3B1AR17 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd3B1AR17 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.9■□□□□ 0.62
Chd3B1AR17 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Chd3B1AR17 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chd3B1AR17 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chd3B1AR17 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Chd3B1AR17 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.9■□□□□ 0.62
Chd3B1AR17 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd3B1AR17 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chd3B1AR17 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.89■□□□□ 0.62
Chd3B1AR17 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chd3B1AR17 Gm6211-202ENSMUST00000167849 925 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms