Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6n-7A0A075B6A6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6n-7A0A075B6A6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6n-7A0A075B6A6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Gm27801-201ENSMUST00000184174 223 ntBASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6n-7A0A075B6A6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6n-7A0A075B6A6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav6n-7A0A075B6A6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trav6n-7A0A075B6A6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm15039-201ENSMUST00000118914 875 ntBASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6n-7A0A075B6A6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Notumos-201ENSMUST00000151998 2659 ntBASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav6n-7A0A075B6A6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6n-7A0A075B6A6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms