Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav14n-3A0A075B645 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.57□□□□□ -0.08
Trav14n-3A0A075B645 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav14n-3A0A075B645 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav14n-3A0A075B645 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Gm7332-201ENSMUST00000118351 454 ntBASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Mir6236-201ENSMUST00000184437 123 ntBASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav14n-3A0A075B645 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav14n-3A0A075B645 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms