Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Gm43137-201ENSMUST00000198052 594 ntBASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a2Q9JLR1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.37■□□□□ 0.37
Sec61a2Q9JLR1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a2Q9JLR1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a2Q9JLR1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Golph3-202ENSMUST00000226517 2359 ntBASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sec61a2Q9JLR1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.33■□□□□ 0.37
Sec61a2Q9JLR1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms