Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
SCAF1Q9H7N4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 AC006970.2-201ENST00000450065 779 ntBASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.76
SCAF1Q9H7N4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC32.26■■■□□ 2.75
SCAF1Q9H7N4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC32.26■■■□□ 2.75
SCAF1Q9H7N4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC32.26■■■□□ 2.75
SCAF1Q9H7N4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.26■■■□□ 2.75
SCAF1Q9H7N4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SCAF1Q9H7N4 AC090877.2-201ENST00000558441 1738 ntBASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 DET1-205ENST00000558413 583 ntTSL 4 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
SCAF1Q9H7N4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 AC016769.1-201ENST00000409132 1010 ntBASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 AC006455.2-201ENST00000429931 906 ntBASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
SCAF1Q9H7N4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
SCAF1Q9H7N4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 AC012414.1-201ENST00000556676 535 ntBASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 AL499627.2-201ENST00000606283 725 ntBASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SCAF1Q9H7N4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 AC004812.2-201ENST00000611079 2094 ntBASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.21■■■□□ 2.75
SCAF1Q9H7N4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SCAF1Q9H7N4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC32.2■■■□□ 2.75
SCAF1Q9H7N4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
SCAF1Q9H7N4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.74
SCAF1Q9H7N4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
SCAF1Q9H7N4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC32.2■■■□□ 2.74
SCAF1Q9H7N4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
SCAF1Q9H7N4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 AC073130.3-201ENST00000624389 2278 ntBASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SCAF1Q9H7N4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC32.18■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms