Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chmp2aQ9DB34 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chmp2aQ9DB34 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.17■□□□□ 0.82
Chmp2aQ9DB34 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chmp2aQ9DB34 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Gm43060-201ENSMUST00000200621 289 ntBASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chmp2aQ9DB34 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Chmp2aQ9DB34 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp2aQ9DB34 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp2aQ9DB34 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp2aQ9DB34 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Chmp2aQ9DB34 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms