Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sf3a3Q9D554 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Grk6-206ENSMUST00000224995 2971 ntBASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sf3a3Q9D554 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sf3a3Q9D554 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sf3a3Q9D554 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Gm14523-201ENSMUST00000117260 558 ntBASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sf3a3Q9D554 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.58■□□□□ 0.73
Sf3a3Q9D554 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sf3a3Q9D554 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Sf3a3Q9D554 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sf3a3Q9D554 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms