Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Cap2-205ENSMUST00000225824 1634 ntBASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chaf1bQ9D0N7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Chaf1bQ9D0N7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Chaf1bQ9D0N7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1bQ9D0N7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Chaf1bQ9D0N7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.14■□□□□ 0.5
Chaf1bQ9D0N7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.14■□□□□ 0.49
Chaf1bQ9D0N7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Gm5921-201ENSMUST00000075898 882 ntBASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chaf1bQ9D0N7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chaf1bQ9D0N7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chaf1bQ9D0N7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Chaf1bQ9D0N7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms