Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.01■■□□□ 1.11
Trim11Q99PQ2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim11Q99PQ2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim11Q99PQ2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Trim11Q99PQ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim11Q99PQ2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim11Q99PQ2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trim11Q99PQ2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22■■□□□ 1.11
Trim11Q99PQ2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.99■■□□□ 1.11
Trim11Q99PQ2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
Trim11Q99PQ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim11Q99PQ2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim11Q99PQ2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim11Q99PQ2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.11
Trim11Q99PQ2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim11Q99PQ2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim11Q99PQ2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim11Q99PQ2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim11Q99PQ2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Trim11Q99PQ2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.93■■□□□ 1.1
Trim11Q99PQ2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim11Q99PQ2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Trim11Q99PQ2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms