Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.31■□□□□ 0.84
Usp11Q99K46 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp11Q99K46 Mir6236-201ENSMUST00000184437 123 ntBASIC20.31■□□□□ 0.84
Usp11Q99K46 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp11Q99K46 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.3■□□□□ 0.84
Usp11Q99K46 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp11Q99K46 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.3■□□□□ 0.84
Usp11Q99K46 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Usp11Q99K46 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp11Q99K46 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp11Q99K46 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp11Q99K46 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Usp11Q99K46 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Usp11Q99K46 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp11Q99K46 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp11Q99K46 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.27■□□□□ 0.84
Usp11Q99K46 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Usp11Q99K46 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp11Q99K46 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.27■□□□□ 0.84
Usp11Q99K46 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.27■□□□□ 0.84
Usp11Q99K46 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.27■□□□□ 0.84
Usp11Q99K46 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp11Q99K46 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Usp11Q99K46 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.27■□□□□ 0.83
Usp11Q99K46 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Usp11Q99K46 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Gm45417-201ENSMUST00000209533 758 ntBASIC20.26■□□□□ 0.83
Usp11Q99K46 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.26■□□□□ 0.83
Usp11Q99K46 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Usp11Q99K46 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp11Q99K46 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Usp11Q99K46 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.25■□□□□ 0.83
Usp11Q99K46 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Usp11Q99K46 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp11Q99K46 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Usp11Q99K46 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp11Q99K46 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp11Q99K46 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp11Q99K46 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp11Q99K46 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp11Q99K46 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp11Q99K46 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Usp11Q99K46 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp11Q99K46 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms