Protein–RNA interactions for Protein: Q99JH7

Clstn3, Calsyntenin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3Q99JH7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clstn3Q99JH7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
Clstn3Q99JH7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clstn3Q99JH7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clstn3Q99JH7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clstn3Q99JH7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clstn3Q99JH7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clstn3Q99JH7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.76■□□□□ 0.91
Clstn3Q99JH7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clstn3Q99JH7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clstn3Q99JH7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clstn3Q99JH7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clstn3Q99JH7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Gm20049-201ENSMUST00000219950 730 ntBASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clstn3Q99JH7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Gm7860-201ENSMUST00000121190 879 ntBASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Clstn3Q99JH7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.73■□□□□ 0.91
Clstn3Q99JH7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Gm8520-201ENSMUST00000186517 868 ntBASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Clstn3Q99JH7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.71■□□□□ 0.91
Clstn3Q99JH7 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Clstn3Q99JH7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clstn3Q99JH7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clstn3Q99JH7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Clstn3Q99JH7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.7■□□□□ 0.9
Clstn3Q99JH7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.69■□□□□ 0.9
Clstn3Q99JH7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.69■□□□□ 0.9
Clstn3Q99JH7 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.69■□□□□ 0.9
Clstn3Q99JH7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Clstn3Q99JH7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.68■□□□□ 0.9
Clstn3Q99JH7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms