Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga3Q91XY5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga3Q91XY5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga3Q91XY5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga3Q91XY5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.14■□□□□ 0.33
Pcdhga3Q91XY5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhga3Q91XY5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga3Q91XY5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga3Q91XY5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhga3Q91XY5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhga3Q91XY5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Gm43137-201ENSMUST00000198052 594 ntBASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhga3Q91XY5 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhga3Q91XY5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhga3Q91XY5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhga3Q91XY5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhga3Q91XY5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms