Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Pcdhgb1Q91XX8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Iqck-206ENSMUST00000208658 2891 ntBASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 AV356131-201ENSMUST00000206201 750 ntBASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.15■□□□□ 0.82
Pcdhgb1Q91XX8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pcdhgb1Q91XX8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Pcdhgb1Q91XX8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pcdhgb1Q91XX8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.14■□□□□ 0.81
Pcdhgb1Q91XX8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.14■□□□□ 0.81
Pcdhgb1Q91XX8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.14■□□□□ 0.81
Pcdhgb1Q91XX8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Pcdhgb1Q91XX8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.13■□□□□ 0.81
Pcdhgb1Q91XX8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pcdhgb1Q91XX8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb1Q91XX8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Gm37179-201ENSMUST00000194862 823 ntBASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb1Q91XX8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb1Q91XX8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.08■□□□□ 0.81
Pcdhgb1Q91XX8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb1Q91XX8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms