Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb17Q91VD8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb17Q91VD8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdhb17Q91VD8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb17Q91VD8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb17Q91VD8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb17Q91VD8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb17Q91VD8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb17Q91VD8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Gm18284-201ENSMUST00000172604 624 ntBASIC20■□□□□ 0.79
Pcdhb17Q91VD8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb17Q91VD8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 CT009738.1-201ENSMUST00000219031 809 ntBASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb17Q91VD8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Gm19087-201ENSMUST00000191430 946 ntBASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb17Q91VD8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb17Q91VD8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb17Q91VD8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb17Q91VD8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb17Q91VD8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Gm8495-201ENSMUST00000188740 694 ntBASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb17Q91VD8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms