Protein–RNA interactions for Protein: Q8VH37

Hdac8, Histone deacetylase 8, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac8Q8VH37 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.98■□□□□ 0.63
Hdac8Q8VH37 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Gm29257-201ENSMUST00000186115 639 ntBASIC18.97■□□□□ 0.63
Hdac8Q8VH37 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hdac8Q8VH37 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.96■□□□□ 0.63
Hdac8Q8VH37 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hdac8Q8VH37 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hdac8Q8VH37 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Gm7860-201ENSMUST00000121190 879 ntBASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.93■□□□□ 0.62
Hdac8Q8VH37 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hdac8Q8VH37 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Gm12933-201ENSMUST00000120203 872 ntBASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hdac8Q8VH37 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hdac8Q8VH37 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms