Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa1Q8VEE4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpa1Q8VEE4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rpa1Q8VEE4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpa1Q8VEE4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpa1Q8VEE4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpa1Q8VEE4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpa1Q8VEE4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpa1Q8VEE4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Rpa1Q8VEE4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Rpa1Q8VEE4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpa1Q8VEE4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms