Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rprd1aQ8VDS4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rprd1aQ8VDS4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rprd1aQ8VDS4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rprd1aQ8VDS4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.91■□□□□ 0.78
Rprd1aQ8VDS4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rprd1aQ8VDS4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Gm27801-201ENSMUST00000184174 223 ntBASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rprd1aQ8VDS4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rprd1aQ8VDS4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rprd1aQ8VDS4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rprd1aQ8VDS4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
Rprd1aQ8VDS4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rprd1aQ8VDS4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rprd1aQ8VDS4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rprd1aQ8VDS4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rprd1aQ8VDS4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rprd1aQ8VDS4 Gm8495-201ENSMUST00000188740 694 ntBASIC19.85■□□□□ 0.77
Rprd1aQ8VDS4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rprd1aQ8VDS4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Rprd1aQ8VDS4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rprd1aQ8VDS4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rprd1aQ8VDS4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.83■□□□□ 0.77
Rprd1aQ8VDS4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rprd1aQ8VDS4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms