Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC24.94■■□□□ 1.58
Chmp7Q8R1T1 Gm10655-201ENSMUST00000098658 1397 ntBASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Gm13148-201ENSMUST00000118892 745 ntBASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Chmp7Q8R1T1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Gm10653-202ENSMUST00000139570 835 ntBASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Chmp7Q8R1T1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Chmp7Q8R1T1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.9■■□□□ 1.58
Chmp7Q8R1T1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC24.9■■□□□ 1.58
Chmp7Q8R1T1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chmp7Q8R1T1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chmp7Q8R1T1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Chmp7Q8R1T1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Gm5408-201ENSMUST00000197998 747 ntBASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Chmp7Q8R1T1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Chmp7Q8R1T1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Chmp7Q8R1T1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Chmp7Q8R1T1 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.88■■□□□ 1.57
Chmp7Q8R1T1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Chmp7Q8R1T1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Chmp7Q8R1T1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Chmp7Q8R1T1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Chmp7Q8R1T1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC24.87■■□□□ 1.57
Chmp7Q8R1T1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chmp7Q8R1T1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
Chmp7Q8R1T1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.85■■□□□ 1.57
Chmp7Q8R1T1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.85■■□□□ 1.57
Chmp7Q8R1T1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Chmp7Q8R1T1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Gm43859-201ENSMUST00000200075 1412 ntBASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Chmp7Q8R1T1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Chmp7Q8R1T1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Chmp7Q8R1T1 Gm7860-201ENSMUST00000121190 879 ntBASIC24.83■■□□□ 1.57
Chmp7Q8R1T1 Gm6211-202ENSMUST00000167849 925 ntBASIC24.83■■□□□ 1.57
Chmp7Q8R1T1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC24.83■■□□□ 1.57
Chmp7Q8R1T1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.56
Chmp7Q8R1T1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
Chmp7Q8R1T1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Chmp7Q8R1T1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chmp7Q8R1T1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
Chmp7Q8R1T1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms