Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Gm6139-201ENSMUST00000079261 882 ntBASIC18.28■□□□□ 0.52
Clrn1Q8K445 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clrn1Q8K445 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clrn1Q8K445 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Clrn1Q8K445 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Clrn1Q8K445 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Clrn1Q8K445 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clrn1Q8K445 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Gm43173-201ENSMUST00000202246 593 ntBASIC18.26■□□□□ 0.51
Clrn1Q8K445 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.26■□□□□ 0.51
Clrn1Q8K445 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Clrn1Q8K445 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.25■□□□□ 0.51
Clrn1Q8K445 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.25■□□□□ 0.51
Clrn1Q8K445 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.25■□□□□ 0.51
Clrn1Q8K445 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.24■□□□□ 0.51
Clrn1Q8K445 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Clrn1Q8K445 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Serp2-204ENSMUST00000228055 705 ntBASIC18.23■□□□□ 0.51
Clrn1Q8K445 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.23■□□□□ 0.51
Clrn1Q8K445 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clrn1Q8K445 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gm43017-201ENSMUST00000198296 752 ntBASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clrn1Q8K445 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Smad6-203ENSMUST00000179458 273 ntBASIC18.21■□□□□ 0.51
Clrn1Q8K445 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clrn1Q8K445 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clrn1Q8K445 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clrn1Q8K445 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms