Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm43060-201ENSMUST00000200621 289 ntBASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Usp44Q8C2S0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Gm27801-201ENSMUST00000184174 223 ntBASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
Usp44Q8C2S0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Usp44Q8C2S0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.78■■□□□ 1.24
Usp44Q8C2S0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Usp44Q8C2S0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Usp44Q8C2S0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.75■■□□□ 1.23
Usp44Q8C2S0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Usp44Q8C2S0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Usp44Q8C2S0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Usp44Q8C2S0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms