Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3rf2Q8BZT2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3rf2Q8BZT2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sh3rf2Q8BZT2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.68■□□□□ 0.74
Sh3rf2Q8BZT2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Gm13146-201ENSMUST00000118508 780 ntBASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sh3rf2Q8BZT2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Sh3rf2Q8BZT2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sh3rf2Q8BZT2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3rf2Q8BZT2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sh3rf2Q8BZT2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.64■□□□□ 0.73
Sh3rf2Q8BZT2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sh3rf2Q8BZT2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.62■□□□□ 0.73
Sh3rf2Q8BZT2 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.61■□□□□ 0.73
Sh3rf2Q8BZT2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms