Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcal1Q8BJL0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.67■□□□□ 0.9
Smarcal1Q8BJL0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcal1Q8BJL0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Gm12527-201ENSMUST00000117967 564 ntBASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Gm6211-202ENSMUST00000167849 925 ntBASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Gm5408-201ENSMUST00000197998 747 ntBASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcal1Q8BJL0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Smarcal1Q8BJL0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcal1Q8BJL0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcal1Q8BJL0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcal1Q8BJL0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Gm22240-201ENSMUST00000175225 82 ntBASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcal1Q8BJL0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcal1Q8BJL0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms