Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tdp1Q8BJ37 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tdp1Q8BJ37 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.48■■□□□ 1.03
Tdp1Q8BJ37 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Tdp1Q8BJ37 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp1Q8BJ37 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Gm7860-201ENSMUST00000121190 879 ntBASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Gm6211-202ENSMUST00000167849 925 ntBASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tdp1Q8BJ37 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Gm20760-201ENSMUST00000179197 648 ntBASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Tdp1Q8BJ37 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp1Q8BJ37 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Tdp1Q8BJ37 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp1Q8BJ37 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Gm22240-201ENSMUST00000175225 82 ntBASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Tdp1Q8BJ37 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tdp1Q8BJ37 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp1Q8BJ37 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Tdp1Q8BJ37 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.39■■□□□ 1.01
Tdp1Q8BJ37 Gm20049-201ENSMUST00000219950 730 ntBASIC21.39■■□□□ 1.01
Tdp1Q8BJ37 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp1Q8BJ37 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms