Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc5a7Q8BGY9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc5a7Q8BGY9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Slc5a7Q8BGY9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Slc5a7Q8BGY9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Slc5a7Q8BGY9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Gm10420-201ENSMUST00000121713 882 ntBASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc5a7Q8BGY9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Gm7143-201ENSMUST00000222811 859 ntBASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc5a7Q8BGY9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc5a7Q8BGY9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc5a7Q8BGY9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.91■□□□□ 0.3
Slc5a7Q8BGY9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc5a7Q8BGY9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms