Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smndc1Q8BGT7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smndc1Q8BGT7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smndc1Q8BGT7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smndc1Q8BGT7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smndc1Q8BGT7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Gm10399-202ENSMUST00000202768 748 ntBASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.64■□□□□ 0.57
Smndc1Q8BGT7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smndc1Q8BGT7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.62■□□□□ 0.57
Smndc1Q8BGT7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms