Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.08■□□□□ 0.64
Ubp1Q811S7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubp1Q811S7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ubp1Q811S7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.08■□□□□ 0.64
Ubp1Q811S7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ubp1Q811S7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ubp1Q811S7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.06■□□□□ 0.64
Ubp1Q811S7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ubp1Q811S7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.05■□□□□ 0.64
Ubp1Q811S7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Ubp1Q811S7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ubp1Q811S7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Gm43060-201ENSMUST00000200621 289 ntBASIC19.03■□□□□ 0.64
Ubp1Q811S7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.03■□□□□ 0.64
Ubp1Q811S7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ubp1Q811S7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ubp1Q811S7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.02■□□□□ 0.64
Ubp1Q811S7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Ubp1Q811S7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ubp1Q811S7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ubp1Q811S7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ubp1Q811S7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ubp1Q811S7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ubp1Q811S7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubp1Q811S7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ubp1Q811S7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.98■□□□□ 0.63
Ubp1Q811S7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms