Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp8Q80U87 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp8Q80U87 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp8Q80U87 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp8Q80U87 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Usp8Q80U87 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp8Q80U87 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.3■□□□□ 0.68
Usp8Q80U87 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp8Q80U87 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp8Q80U87 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp8Q80U87 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp8Q80U87 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.3■□□□□ 0.68
Usp8Q80U87 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp8Q80U87 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.29■□□□□ 0.68
Usp8Q80U87 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp8Q80U87 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp8Q80U87 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp8Q80U87 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp8Q80U87 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp8Q80U87 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Gm12922-201ENSMUST00000120626 809 ntBASIC19.28■□□□□ 0.68
Usp8Q80U87 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Golgb1-201ENSMUST00000023534 498 ntBASIC19.28■□□□□ 0.68
Usp8Q80U87 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp8Q80U87 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Usp8Q80U87 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp8Q80U87 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp8Q80U87 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp8Q80U87 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp8Q80U87 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp8Q80U87 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Usp8Q80U87 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp8Q80U87 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.26■□□□□ 0.67
Usp8Q80U87 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Usp8Q80U87 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp8Q80U87 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Usp8Q80U87 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp8Q80U87 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Usp8Q80U87 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms