Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Exosc3Q7TQK4 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Exosc3Q7TQK4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Exosc3Q7TQK4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.8■□□□□ 0.44
Exosc3Q7TQK4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Exosc3Q7TQK4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Exosc3Q7TQK4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Exosc3Q7TQK4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Exosc3Q7TQK4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Exosc3Q7TQK4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Exosc3Q7TQK4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Exosc3Q7TQK4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Exosc3Q7TQK4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms