Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx4Q7TNK1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx4Q7TNK1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx4Q7TNK1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Gm43530-201ENSMUST00000195920 274 ntBASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx4Q7TNK1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rfx4Q7TNK1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Rfx4Q7TNK1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfx4Q7TNK1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfx4Q7TNK1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rfx4Q7TNK1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms