Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Gm10399-202ENSMUST00000202768 748 ntBASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TwistnbQ78WZ7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TwistnbQ78WZ7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TwistnbQ78WZ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Gm45444-201ENSMUST00000211394 898 ntBASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TwistnbQ78WZ7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Grk6-206ENSMUST00000224995 2971 ntBASIC19.68■□□□□ 0.74
TwistnbQ78WZ7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TwistnbQ78WZ7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TwistnbQ78WZ7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.65■□□□□ 0.74
TwistnbQ78WZ7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms