Protein–RNA interactions for Protein: Q6ZPY7

Kdm3b, Lysine-specific demethylase 3B, mousemouse

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3bQ6ZPY7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Kdm3bQ6ZPY7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Kdm3bQ6ZPY7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
Kdm3bQ6ZPY7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Kdm3bQ6ZPY7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC28.5■■■□□ 2.15
Kdm3bQ6ZPY7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Kdm3bQ6ZPY7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Gm7290-201ENSMUST00000104990 617 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Gm12918-201ENSMUST00000120234 636 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Gm15710-201ENSMUST00000121821 636 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Gm5075-201ENSMUST00000196916 622 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Kdm3bQ6ZPY7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Gm8520-201ENSMUST00000186517 868 ntBASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Kdm3bQ6ZPY7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kdm3bQ6ZPY7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kdm3bQ6ZPY7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kdm3bQ6ZPY7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Kdm3bQ6ZPY7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Kdm3bQ6ZPY7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.15
Kdm3bQ6ZPY7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC28.45■■■□□ 2.15
Kdm3bQ6ZPY7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Kdm3bQ6ZPY7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Kdm3bQ6ZPY7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Kdm3bQ6ZPY7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Kdm3bQ6ZPY7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC28.45■■■□□ 2.14
Kdm3bQ6ZPY7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC28.45■■■□□ 2.14
Kdm3bQ6ZPY7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Kdm3bQ6ZPY7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Kdm3bQ6ZPY7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Kdm3bQ6ZPY7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Gm27032-201ENSMUST00000183124 1116 ntBASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Kdm3bQ6ZPY7 Gm43006-201ENSMUST00000197702 1602 ntBASIC28.42■■■□□ 2.14
Kdm3bQ6ZPY7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3bQ6ZPY7 Gm7977-201ENSMUST00000193787 748 ntBASIC28.42■■■□□ 2.14
Kdm3bQ6ZPY7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3bQ6ZPY7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Kdm3bQ6ZPY7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 AC122769.4-201ENSMUST00000228166 901 ntBASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Kdm3bQ6ZPY7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Kdm3bQ6ZPY7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kdm3bQ6ZPY7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kdm3bQ6ZPY7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Kdm3bQ6ZPY7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm3bQ6ZPY7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm3bQ6ZPY7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm3bQ6ZPY7 Gm13168-201ENSMUST00000121771 632 ntBASIC28.39■■■□□ 2.14
Kdm3bQ6ZPY7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Kdm3bQ6ZPY7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Kdm3bQ6ZPY7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3bQ6ZPY7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3bQ6ZPY7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3bQ6ZPY7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3bQ6ZPY7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Kdm3bQ6ZPY7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms