Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gm26571-201ENSMUST00000181399 666 ntBASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Rtl3Q6P1Y1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rtl3Q6P1Y1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.02■□□□□ 0.79
Rtl3Q6P1Y1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Rtl3Q6P1Y1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rtl3Q6P1Y1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20■□□□□ 0.79
Rtl3Q6P1Y1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Gm10849-201ENSMUST00000100397 618 ntBASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Gm27405-201ENSMUST00000184201 112 ntBASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rtl3Q6P1Y1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rtl3Q6P1Y1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Gm27801-201ENSMUST00000184174 223 ntBASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rtl3Q6P1Y1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.96■□□□□ 0.79
Rtl3Q6P1Y1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Gm42569-201ENSMUST00000200539 472 ntBASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Gm42642-201ENSMUST00000200683 355 ntBASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Rtl3Q6P1Y1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
Rtl3Q6P1Y1 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms